Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isxo2 transposase-like protein | LV84_03348 | Not Available | Negative | 3864446 - 3864783 | 13168.7 |
| putative colanic acid biosynthesis udp-glucose lipid carrier transferase | LV84_03349 | Not Available | Negative | 3865611 - 3866240 | 24172.7 |
| flaa1/epsc-like ndp-sugar epimerase | LV84_03350 | Not Available | Positive | 3866939 - 3868849 | 71801.4 |
| hypothetical protein | LV84_03351 | Not Available | Positive | 3869085 - 3870662 | 57999.6 |
| hypothetical protein | LV84_03352 | Not Available | Negative | 3871228 - 3871662 | 15869.3 |
| 23s rrna (cytosine1962-c5)-methyltransferase | LV84_03353 | Not Available | Negative | 3871729 - 3872910 | 43992.6 |
| sss family transporter | LV84_03354 | Not Available | Negative | 3872897 - 3874294 | 50050.5 |
| atpase subunit of abc transporter with duplicated atpase domains | LV84_03355 | Not Available | Negative | 3874305 - 3875924 | 60821.8 |
| sprb-like repeat protein | LV84_03356 | Not Available | Positive | 3876087 - 3879191 | 112690.0 |
| udp-glucose 4-epimerase | LV84_03357 | Not Available | Positive | 3879310 - 3880359 | 38704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
