Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose dehydrogenase | LV84_03338 | Not Available | Positive | 3851991 - 3852755 | 27462.0 |
| fhs family l-fucose permease-like mfs transporter | LV84_03339 | Not Available | Positive | 3852789 - 3854096 | 47497.4 |
| l-rhamnose mutarotase | LV84_03340 | Not Available | Positive | 3854320 - 3854661 | 13181.7 |
| acetyl esterase/lipase | LV84_03341 | Not Available | Positive | 3854778 - 3855692 | 33341.9 |
| putative hydrolase of the had superfamily | LV84_03342 | Not Available | Positive | 3855965 - 3856654 | 26608.4 |
| atp-binding cassette, subfamily b, msba | LV84_03343 | Not Available | Negative | 3856773 - 3858518 | 63718.0 |
| two-component system cheb/cher fusion protein | LV84_03344 | Not Available | Positive | 3858795 - 3861983 | 120391.0 |
| putative dna metabolism protein | LV84_03345 | Not Available | Negative | 3862250 - 3863029 | 30832.9 |
| hypothetical protein | LV84_03346 | Not Available | Negative | 3863030 - 3863620 | 22958.8 |
| putative dna modification/repair radical sam protein | LV84_03347 | Not Available | Negative | 3863684 - 3864292 | 22716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
