Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | LV84_03328 | Not Available | Negative | 3842865 - 3843443 | 22209.3 |
| Trna-leu | Not Available | Not Available | Positive | 3843775 - 3843859 | Not Available |
| s-formylglutathione hydrolase frmb | LV84_03330 | Not Available | Positive | 3843964 - 3844809 | 31575.9 |
| glycerol-3-phosphate acyltransferase | LV84_03331 | Not Available | Positive | 3844899 - 3846053 | 44072.7 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LV84_03332 | Not Available | Negative | 3846028 - 3847248 | 45362.7 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | LV84_03333 | Not Available | Positive | 3847309 - 3847989 | 25560.5 |
| putative dehydrogenase | LV84_03334 | Not Available | Positive | 3847979 - 3849061 | 40284.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_03335 | Not Available | Positive | 3849182 - 3849985 | 28509.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | LV84_03336 | Not Available | Positive | 3850200 - 3851060 | 31362.4 |
| l-fuconolactonase | LV84_03337 | Not Available | Positive | 3851057 - 3851881 | 31961.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
