Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoxide reductase heme-binding subunit yedz | LV84_03318 | Not Available | Positive | 3832623 - 3833237 | 22931.0 |
| nad(p)h dehydrogenase (quinone) | LV84_03319 | Not Available | Positive | 3833250 - 3834110 | 31455.1 |
| flavin-dependent oxidoreductase | LV84_03320 | Not Available | Positive | 3834122 - 3834850 | 27322.9 |
| hypothetical protein | LV84_03321 | Not Available | Positive | 3834991 - 3835512 | 20852.5 |
| antitoxin pard1/3/4 | LV84_03322 | Not Available | Positive | 3835777 - 3836013 | 8916.67 |
| hypothetical protein | LV84_03323 | Not Available | Positive | 3836010 - 3836231 | 8596.37 |
| hypothetical protein | LV84_03324 | Not Available | Positive | 3836504 - 3836875 | 14822.4 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LV84_03325 | Not Available | Negative | 3837148 - 3840285 | 113217.0 |
| membrane fusion protein (multidrug efflux system) | LV84_03326 | Not Available | Negative | 3840355 - 3841470 | 40405.9 |
| outer membrane protein tolc | LV84_03327 | Not Available | Negative | 3841499 - 3842818 | 50595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
