Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine monooxygenase | LV84_03285 | Not Available | Positive | 3799013 - 3800404 | 53884.3 |
| hypothetical protein | LV84_03286 | Not Available | Negative | 3800649 - 3801920 | 48147.2 |
| agcs family alanine or glycine:cation symporter | LV84_03287 | Not Available | Positive | 3802164 - 3803594 | 51487.5 |
| uncharacterized protein duf4943 | LV84_03288 | Not Available | Positive | 3803762 - 3804274 | 19543.2 |
| hypothetical protein | LV84_03289 | Not Available | Positive | 3804418 - 3804837 | 16089.8 |
| cys/met metabolism plp-dependent enzyme | LV84_03290 | Not Available | Positive | 3804998 - 3806842 | 68202.0 |
| short-subunit dehydrogenase | LV84_03291 | Not Available | Positive | 3806954 - 3807760 | 29296.0 |
| monoamine oxidase | LV84_03292 | Not Available | Positive | 3807846 - 3808889 | 38738.2 |
| hypothetical protein | LV84_03293 | Not Available | Positive | 3809231 - 3809842 | 23339.6 |
| short-subunit dehydrogenase | LV84_03294 | Not Available | Positive | 3810001 - 3810798 | 28746.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
