Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40 repeat protein | LV84_03275 | Not Available | Negative | 3782857 - 3784188 | 48069.9 |
| vcbs repeat protein | LV84_03276 | Not Available | Negative | 3784350 - 3786314 | 73144.0 |
| bnr repeat protein | LV84_03277 | Not Available | Negative | 3786362 - 3787528 | 43906.4 |
| putative neuraminidase | LV84_03278 | Not Available | Negative | 3787554 - 3788696 | 42094.0 |
| putative outer membrane starch-binding protein | LV84_03279 | Not Available | Negative | 3788709 - 3790337 | 61628.2 |
| tonb-linked susc/raga family outer membrane protein | LV84_03280 | Not Available | Negative | 3790371 - 3793373 | 111054.0 |
| l-fucose isomerase-like protein | LV84_03281 | Not Available | Negative | 3793402 - 3795009 | 59844.7 |
| arac-like dna-binding protein | LV84_03282 | Not Available | Positive | 3795233 - 3796102 | 33522.4 |
| putative dehydrogenase | LV84_03283 | Not Available | Negative | 3796203 - 3797546 | 49272.3 |
| hypothetical protein | LV84_03284 | Not Available | Positive | 3797802 - 3798158 | 13772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
