Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a-like enzyme | LV84_03265 | Not Available | Negative | 3770550 - 3772337 | 67825.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_03266 | Not Available | Negative | 3772594 - 3773382 | 27685.1 |
| altronate hydrolase | LV84_03267 | Not Available | Negative | 3773483 - 3774130 | 24625.5 |
| laci family transcriptional regulator | LV84_03268 | Not Available | Positive | 3774214 - 3775266 | 39673.1 |
| hypothetical protein | LV84_03269 | Not Available | Positive | 3775800 - 3776108 | 11952.3 |
| hypothetical protein | LV84_03270 | Not Available | Negative | 3776649 - 3777869 | 44678.8 |
| peroxiredoxin | LV84_03271 | Not Available | Negative | 3777870 - 3778415 | 20788.9 |
| l-ribulokinase | LV84_03272 | Not Available | Negative | 3778545 - 3780212 | 60400.1 |
| sss family solute:na+ symporter | LV84_03273 | Not Available | Negative | 3780209 - 3781711 | 54784.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | LV84_03274 | Not Available | Negative | 3781911 - 3782852 | 34489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
