Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_03225 | Not Available | Positive | 3721554 - 3722177 | 24923.6 |
| hypothetical protein | LV84_03226 | Not Available | Positive | 3722537 - 3723061 | 19689.0 |
| hypothetical protein | LV84_03227 | Not Available | Positive | 3723089 - 3723229 | 5516.38 |
| uncharacterized protein duf4856 | LV84_03228 | Not Available | Positive | 3723426 - 3724601 | 42530.5 |
| imelysin | LV84_03229 | Not Available | Positive | 3724676 - 3725803 | 41389.7 |
| vitamin k-dependent gamma-carboxylase-like protein | LV84_03230 | Not Available | Positive | 3725790 - 3727166 | 53251.0 |
| fe(3+) dicitrate transport protein | LV84_03231 | Not Available | Positive | 3727147 - 3729567 | 91085.0 |
| regulator of nucleoside diphosphate kinase | LV84_03232 | Not Available | Positive | 3730180 - 3730557 | 14165.2 |
| transketolase | LV84_03233 | Not Available | Positive | 3731427 - 3732203 | 28559.3 |
| hypothetical protein | LV84_03234 | Not Available | Negative | 3732121 - 3732318 | 7517.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
