Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_03205 | Not Available | Positive | 3702255 - 3702425 | 6035.17 |
| beta-glucosidase-like glycosyl hydrolase | LV84_03206 | Not Available | Negative | 3702377 - 3703888 | 55419.4 |
| pat family beta-lactamase induction signal transducer ampg | LV84_03207 | Not Available | Negative | 3704088 - 3705353 | 46547.0 |
| acetyltransferase (gnat) family protein | LV84_03208 | Not Available | Negative | 3705350 - 3705829 | 18051.1 |
| uncharacterized lipoprotein yddw (upf0748 family) | LV84_03209 | Not Available | Negative | 3705840 - 3707474 | 62390.3 |
| n-acetylmuramoyl-l-alanine amidase | LV84_03210 | Not Available | Negative | 3707485 - 3708168 | 26009.2 |
| deor family transcriptional regulator | LV84_03211 | Not Available | Positive | 3708355 - 3709104 | 27832.2 |
| copper chaperone copz | LV84_03212 | Not Available | Negative | 3709324 - 3709680 | 13259.1 |
| outer membrane receptor for ferrienterochelin and colicin | LV84_03213 | Not Available | Negative | 3709774 - 3711987 | 82560.5 |
| hypothetical protein | LV84_03214 | Not Available | Negative | 3712051 - 3712410 | 13043.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
