Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_03195 | Not Available | Positive | 3689634 - 3690386 | 26016.8 |
| nitric oxide reductase subunit b | LV84_03196 | Not Available | Negative | 3690561 - 3692774 | 84058.9 |
| badm/rrf2 family transcriptional regulator | LV84_03197 | Not Available | Negative | 3692917 - 3693354 | 16281.9 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolase | LV84_03198 | Not Available | Positive | 3693605 - 3694255 | 23015.8 |
| glucokinase | LV84_03199 | Not Available | Negative | 3694471 - 3695331 | 31184.7 |
| glucosamine-6-phosphate deaminase | LV84_03200 | Not Available | Negative | 3695418 - 3697745 | 87805.1 |
| 6-phosphogluconate dehydrogenase/gluconokinase | LV84_03201 | Not Available | Positive | 3698250 - 3698747 | 18577.4 |
| imidazolonepropionase-like amidohydrolase | LV84_03202 | Not Available | Positive | 3698840 - 3700207 | 51190.6 |
| aldose 1-epimerase | LV84_03203 | Not Available | Positive | 3700327 - 3701466 | 41497.2 |
| putative outer membrane protein | LV84_03204 | Not Available | Positive | 3701567 - 3702202 | 23227.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
