Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter dctp family solute receptor | LV84_00305 | Not Available | Negative | 375762 - 376748 | 36672.3 |
| altronate hydrolase | LV84_00306 | Not Available | Positive | 377130 - 378776 | 59005.7 |
| putative dehydrogenase | LV84_00307 | Not Available | Negative | 378773 - 379813 | 37334.8 |
| 3-dehydro-l-gulonate 2-dehydrogenase | LV84_00308 | Not Available | Negative | 379810 - 380823 | 36684.1 |
| putative glyoxalase superfamily protein phnb | LV84_00309 | Not Available | Negative | 380887 - 381270 | 14062.9 |
| oxidoreductase family protein | LV84_00310 | Not Available | Negative | 381449 - 382849 | 52782.6 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | LV84_00311 | Not Available | Positive | 383095 - 383934 | 31641.7 |
| gluconate 5-dehydrogenase | LV84_00312 | Not Available | Positive | 384123 - 384908 | 27736.5 |
| laci family transcriptional regulator | LV84_00313 | Not Available | Positive | 384957 - 385988 | 38417.1 |
| tagaturonate reductase | LV84_00314 | Not Available | Positive | 386014 - 387417 | 52768.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
