Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase-peroxidase | LV84_03165 | Not Available | Positive | 3650766 - 3653024 | 82435.1 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | LV84_03166 | Not Available | Negative | 3653280 - 3653981 | 26550.5 |
| hypothetical protein | LV84_03167 | Not Available | Negative | 3654166 - 3654567 | 15066.9 |
| gntp family gluconate:h+ symporter | LV84_03168 | Not Available | Negative | 3654636 - 3655967 | 46300.6 |
| glycosyl hydrolase family 20 | LV84_03169 | Not Available | Positive | 3656166 - 3658244 | 78764.0 |
| hypothetical protein | LV84_03170 | Not Available | Positive | 3658253 - 3658381 | 4540.65 |
| acyl-coa hydrolase | LV84_03171 | Not Available | Negative | 3658574 - 3659050 | 18198.7 |
| glutamate/tyrosine decarboxylase-like plp-dependent enzyme | LV84_03172 | Not Available | Negative | 3659155 - 3660627 | 54366.9 |
| mosc domain-containing protein yiim | LV84_03173 | Not Available | Negative | 3660929 - 3661564 | 24201.8 |
| hypothetical protein | LV84_03174 | Not Available | Negative | 3661852 - 3664155 | 85951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
