Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | LV84_03155 | Not Available | Negative | 3639894 - 3641027 | 42048.2 |
| 2fe-2s ferredoxin | LV84_03156 | Not Available | Negative | 3641113 - 3641445 | 12294.7 |
| cbb3-type cytochrome c oxidase subunit iii | LV84_03157 | Not Available | Positive | 3641724 - 3644276 | 94372.2 |
| sugar phosphate isomerase/epimerase | LV84_03158 | Not Available | Positive | 3644280 - 3645380 | 40769.7 |
| hypothetical protein | LV84_03159 | Not Available | Negative | 3645377 - 3645550 | 6369.62 |
| gluconate 5-dehydrogenase | LV84_03160 | Not Available | Positive | 3645601 - 3646383 | 27259.1 |
| hypothetical protein | LV84_03161 | Not Available | Negative | 3646534 - 3647250 | 28010.5 |
| uncharacterized protein duf1648 | LV84_03162 | Not Available | Negative | 3647247 - 3647861 | 23074.7 |
| putative membrane protein duf2207 | LV84_03163 | Not Available | Negative | 3647827 - 3649509 | 63453.1 |
| lema protein | LV84_03164 | Not Available | Negative | 3649718 - 3650278 | 21299.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
