Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of sirc expression with transglutaminase-like and tpr domain | LV84_03135 | Not Available | Negative | 3619349 - 3620191 | 32802.3 |
| hypothetical protein | LV84_03136 | Not Available | Negative | 3620582 - 3620818 | 8684.57 |
| acetyl-coa carboxylase carboxyltransferase component | LV84_03137 | Not Available | Negative | 3620856 - 3622484 | 58720.6 |
| iron-sulfur cluster assembly protein | LV84_03138 | Not Available | Negative | 3623793 - 3624107 | 11750.3 |
| hypothetical protein | LV84_03139 | Not Available | Positive | 3624217 - 3624738 | 19865.1 |
| uncharacterized membrane protein ykva (duf1232 family) | LV84_03140 | Not Available | Positive | 3624741 - 3625154 | 15199.7 |
| thioredoxin-like protein | LV84_03141 | Not Available | Positive | 3625186 - 3625806 | 23223.7 |
| nad-dependent epimerase/dehydratase family protein | LV84_03142 | Not Available | Positive | 3625810 - 3626529 | 26490.1 |
| d-tyrosyl-trna(tyr) deacylase | LV84_03143 | Not Available | Positive | 3626526 - 3626978 | 16437.2 |
| arylsulfatase a-like enzyme | LV84_03144 | Not Available | Positive | 3627178 - 3628650 | 55731.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
