Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein (tigr03643 family) | LV84_03105 | Not Available | Positive | 3584098 - 3584361 | 10517.7 |
| deoxyribodipyrimidine photo-lyase | LV84_03106 | Not Available | Positive | 3584361 - 3585464 | 42990.0 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | LV84_03107 | Not Available | Positive | 3585504 - 3586133 | 23451.1 |
| putative membrane protein ydjx (tvp38/tmem64 family) | LV84_03108 | Not Available | Negative | 3586271 - 3586963 | 25736.2 |
| cystathionine beta-lyase | LV84_03109 | Not Available | Positive | 3587096 - 3588241 | 41725.2 |
| arac family transcriptional regulator of adaptative response/methylated-dna-[protein]-cysteine methyltransferase | LV84_03110 | Not Available | Positive | 3589028 - 3589876 | 31459.7 |
| alkylated dna repair dioxygenase alkb | LV84_03111 | Not Available | Positive | 3589885 - 3590493 | 23078.9 |
| tldd protein | LV84_03112 | Not Available | Positive | 3590930 - 3592573 | 59547.1 |
| putative zn-dependent protease | LV84_03113 | Not Available | Positive | 3592590 - 3593927 | 48264.8 |
| uncharacterized protein duf4159 | LV84_03114 | Not Available | Positive | 3594168 - 3594785 | 23713.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
