Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | LV84_00295 | Not Available | Positive | 367119 - 368807 | 63171.3 |
| helix-turn-helix protein | LV84_00296 | Not Available | Negative | 368782 - 369612 | 30608.8 |
| uncharacterized protein duf4397 | LV84_00297 | Not Available | Positive | 369940 - 370662 | 26476.5 |
| hypothetical protein | LV84_00298 | Not Available | Negative | 371302 - 372702 | 51279.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_00299 | Not Available | Negative | 372689 - 373237 | 21439.6 |
| hypothetical protein | LV84_00300 | Not Available | Negative | 373310 - 373546 | 8442.91 |
| hypothetical protein | LV84_00301 | Not Available | Positive | 373603 - 373830 | 8880.73 |
| hypothetical protein | LV84_00302 | Not Available | Positive | 373859 - 374038 | 6436.74 |
| tripartite atp-independent transporter dctm subunit | LV84_00303 | Not Available | Negative | 373954 - 375249 | 45326.2 |
| trap-type c4-dicarboxylate transport system permease small subunit | LV84_00304 | Not Available | Negative | 375249 - 375737 | 18203.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
