Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like protein | LV84_03085 | Not Available | Positive | 3557677 - 3560442 | 105230.0 |
| uncharacterized protein duf664 | LV84_03086 | Not Available | Negative | 3560449 - 3561018 | 21983.1 |
| l-rhamnose mutarotase | LV84_03087 | Not Available | Negative | 3561230 - 3561571 | 13236.8 |
| sugar phosphate isomerase/epimerase | LV84_03088 | Not Available | Negative | 3561844 - 3562659 | 29646.6 |
| threonine dehydrogenase-like zn-dependent dehydrogenase | LV84_03089 | Not Available | Negative | 3562664 - 3563683 | 36978.1 |
| l-galactose dehydrogenase | LV84_03090 | Not Available | Negative | 3563928 - 3564860 | 34882.0 |
| glucose/arabinose dehydrogenase | LV84_03091 | Not Available | Positive | 3565101 - 3567341 | 84322.2 |
| dipeptidyl-peptidase-4 | LV84_03092 | Not Available | Positive | 3567604 - 3569682 | 78392.7 |
| hypothetical protein | LV84_03093 | Not Available | Negative | 3569883 - 3570695 | 31478.6 |
| hypothetical protein | LV84_03094 | Not Available | Positive | 3571015 - 3572127 | 40912.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
