Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor 1 | LV84_03075 | Not Available | Negative | 3547665 - 3548018 | 12763.1 |
| nucleotide-binding universal stress uspa family protein | LV84_03076 | Not Available | Negative | 3548073 - 3548924 | 31506.7 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | LV84_03077 | Not Available | Negative | 3548987 - 3549907 | 33510.6 |
| glutathione peroxidase | LV84_03078 | Not Available | Negative | 3549927 - 3550535 | 23079.7 |
| arginyl-trna synthetase | LV84_03079 | Not Available | Negative | 3550638 - 3552428 | 67682.6 |
| gxxexxy protein | LV84_03080 | Not Available | Negative | 3552489 - 3552884 | 14888.5 |
| arginase | LV84_03081 | Not Available | Negative | 3552975 - 3553925 | 34931.6 |
| methionine aminotransferase | LV84_03082 | Not Available | Positive | 3554321 - 3555469 | 42743.3 |
| hypothetical protein | LV84_03083 | Not Available | Positive | 3555603 - 3556037 | 16350.7 |
| arginine decarboxylase | LV84_03084 | Not Available | Positive | 3556155 - 3557540 | 53614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
