Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cnt family concentrative nucleoside transporter | LV84_03065 | Not Available | Positive | 3532456 - 3533742 | 45519.6 |
| hypothetical protein | LV84_03066 | Not Available | Positive | 3533779 - 3534189 | 15971.8 |
| zn-dependent m28 family amino/carboxypeptidase | LV84_03067 | Not Available | Negative | 3535367 - 3536839 | 53071.3 |
| trna pseudouridine65 synthase | LV84_03068 | Not Available | Negative | 3537044 - 3537751 | 27255.0 |
| pp_03031 | LV84_03069 | Not Available | Negative | 3537899 - 3539113 | Not Available |
| polyphosphate glucokinase/glucose-6-phosphate isomerase | LV84_03070 | Not Available | Negative | 3539412 - 3540086 | 24929.3 |
| hypothetical protein | LV84_03071 | Not Available | Positive | 3540157 - 3540300 | 5314.61 |
| uncharacterized protein (duf2126 family) | LV84_03072 | Not Available | Positive | 3540493 - 3543840 | 127641.0 |
| putative circularly permuted atp-grasp superfamily protein | LV84_03073 | Not Available | Positive | 3543881 - 3546421 | 97280.9 |
| transglutaminase-like putative cysteine protease | LV84_03074 | Not Available | Positive | 3546552 - 3547433 | 33574.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
