Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit epsilon | LV84_03055 | Not Available | Negative | 3522084 - 3522887 | 30558.9 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | LV84_03056 | Not Available | Negative | 3522890 - 3524245 | 50732.8 |
| replicative dna helicase | LV84_03057 | Not Available | Positive | 3524581 - 3526161 | 58310.5 |
| nadph:quinone reductase-like zn-dependent oxidoreductase | LV84_03058 | Not Available | Positive | 3526395 - 3527393 | 36130.4 |
| hypothetical protein | LV84_03059 | Not Available | Negative | 3527390 - 3527875 | 18305.0 |
| hypothetical protein | LV84_03060 | Not Available | Negative | 3528004 - 3529137 | 43247.6 |
| hypothetical protein | LV84_03061 | Not Available | Negative | 3529322 - 3529654 | 12869.0 |
| electron transfer flavoprotein beta subunit | LV84_03062 | Not Available | Positive | 3529729 - 3530466 | 26494.0 |
| electron transfer flavoprotein alpha subunit | LV84_03063 | Not Available | Positive | 3530501 - 3531469 | 33378.1 |
| hypothetical protein | LV84_03064 | Not Available | Positive | 3531476 - 3532072 | 22323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
