Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mate family efflux protein | LV84_03015 | Not Available | Positive | 3485551 - 3486930 | 49789.1 |
| hypothetical protein | LV84_03016 | Not Available | Positive | 3486992 - 3487282 | 10909.0 |
| phnb protein | LV84_03017 | Not Available | Positive | 3487467 - 3487793 | 12045.2 |
| putative surface protein with fasciclin (fas1) repeats | LV84_03018 | Not Available | Negative | 3487857 - 3488402 | 18690.5 |
| uncharacterized protein yehs (duf1456 family) | LV84_03019 | Not Available | Positive | 3488636 - 3489058 | 16154.6 |
| protein sco1/2 | LV84_03020 | Not Available | Negative | 3489048 - 3489746 | 26495.0 |
| formylglycine-generating enzyme required for sulfatase activity | LV84_03021 | Not Available | Negative | 3489751 - 3490515 | 28561.5 |
| nitrite reductase (no-forming) | LV84_03022 | Not Available | Negative | 3490530 - 3491984 | 51654.4 |
| putative repeat protein (tigr03833 family) | LV84_03023 | Not Available | Negative | 3492205 - 3492417 | 7819.54 |
| acyl carrier protein | LV84_03024 | Not Available | Negative | 3492646 - 3492894 | 9559.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
