Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | LV84_02995 | Not Available | Negative | 3464175 - 3466499 | 87141.7 |
| 3-hydroxybutyryl-coa dehydrogenase | LV84_02996 | Not Available | Negative | 3466650 - 3467528 | 32340.9 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_02997 | Not Available | Negative | 3467532 - 3468299 | 27023.1 |
| nadph:quinone reductase-like zn-dependent oxidoreductase | LV84_02998 | Not Available | Positive | 3468720 - 3469700 | 35326.8 |
| hypothetical protein | LV84_02999 | Not Available | Positive | 3469773 - 3470195 | 16196.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | LV84_03000 | Not Available | Positive | 3470332 - 3471588 | 44923.7 |
| hypothetical protein | LV84_03001 | Not Available | Negative | 3471756 - 3471878 | 4350.46 |
| tryptophanyl-trna synthetase | LV84_03002 | Not Available | Negative | 3471988 - 3472962 | 36431.7 |
| uncharacterized protein duf1573 | LV84_03003 | Not Available | Positive | 3473033 - 3474127 | 41010.4 |
| putative secreted protein (por secretion system target) | LV84_03004 | Not Available | Positive | 3474154 - 3474390 | 8715.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
