Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | LV84_00285 | Not Available | Negative | 357382 - 358626 | 45047.2 |
| pp_00286 | LV84_00286 | Not Available | Negative | 358733 - 359344 | Not Available |
| putative beta-barrel porin | LV84_00287 | Not Available | Negative | 359347 - 361308 | 75906.0 |
| lipid-a-disaccharide kinase | LV84_00288 | Not Available | Negative | 361309 - 362364 | 39855.2 |
| dinuclear metal center ybgi/sa1388 family protein | LV84_00289 | Not Available | Positive | 362404 - 363504 | 40434.6 |
| hypothetical protein | LV84_00290 | Not Available | Positive | 363508 - 364296 | 29769.6 |
| hypothetical protein | LV84_00291 | Not Available | Positive | 364407 - 364823 | 15495.8 |
| putative phosphoglycerate mutase | LV84_00292 | Not Available | Negative | 364807 - 365430 | 23561.3 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | LV84_00293 | Not Available | Positive | 365483 - 365905 | 15073.5 |
| isochorismate synthase | LV84_00294 | Not Available | Positive | 365905 - 367122 | 45569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
