Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ion transporter superfamily protein yfcc | LV84_00021 | Not Available | Negative | 27427 - 28761 | 48581.9 |
| cubico group peptidase (beta-lactamase class c family) | LV84_00022 | Not Available | Negative | 28758 - 29888 | 42357.9 |
| cation diffusion facilitator czcd-associated flavoprotein czco | LV84_00023 | Not Available | Negative | 29885 - 31231 | 51305.6 |
| hypothetical protein | LV84_00024 | Not Available | Negative | 31240 - 32178 | 35938.2 |
| nad-dependent deacetylase | LV84_00025 | Not Available | Negative | 32228 - 32926 | 25972.1 |
| trna (guanine-n7-)-methyltransferase | LV84_00026 | Not Available | Negative | 33128 - 33787 | 25754.5 |
| dihydrofolate synthase/folylpolyglutamate synthase | LV84_00027 | Not Available | Negative | 33788 - 35197 | 52316.3 |
| hypothetical protein | LV84_00028 | Not Available | Negative | 35201 - 36157 | 33595.9 |
| biopolymer transport protein exbd | LV84_00029 | Not Available | Negative | 36262 - 36651 | 14116.3 |
| biopolymer transport protein exbb | LV84_00030 | Not Available | Negative | 36653 - 37342 | 24689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
