Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix-type nucleoside diphosphatase (yffh/adpp family) | LV84_02975 | Not Available | Negative | 3439186 - 3439764 | 22018.3 |
| d-serine deaminase-like pyridoxal phosphate-dependent protein | LV84_02976 | Not Available | Negative | 3439916 - 3441025 | 41107.8 |
| alanyl-trna synthetase | LV84_02977 | Not Available | Positive | 3441649 - 3444273 | 98151.5 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | LV84_02978 | Not Available | Positive | 3444295 - 3445755 | 54171.8 |
| peroxiredoxin | LV84_02979 | Not Available | Positive | 3445759 - 3446868 | 41460.4 |
| pyrroline-5-carboxylate reductase | LV84_02980 | Not Available | Negative | 3447148 - 3447951 | 28437.8 |
| hypothetical protein | LV84_02981 | Not Available | Positive | 3448284 - 3448700 | 15439.1 |
| putative transcriptional regulator | LV84_02982 | Not Available | Positive | 3448729 - 3448929 | 7402.93 |
| hypothetical protein | LV84_02983 | Not Available | Negative | 3449066 - 3449200 | 5339.58 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_02984 | Not Available | Positive | 3449281 - 3450447 | 43507.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
