Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-subunit dehydrogenase | LV84_02955 | Not Available | Negative | 3419013 - 3419798 | 28796.9 |
| dihydrofolate reductase | LV84_02956 | Not Available | Negative | 3419805 - 3420299 | 18951.3 |
| uncharacterized protein duf4412 | LV84_02957 | Not Available | Negative | 3420416 - 3421345 | 34592.9 |
| methionyl-trna formyltransferase | LV84_02958 | Not Available | Negative | 3421441 - 3422367 | 34503.9 |
| uncharacterized protein ybbc (duf1343 family) | LV84_02959 | Not Available | Negative | 3422426 - 3423613 | 44309.7 |
| lipoprotein-releasing system permease protein | LV84_02960 | Not Available | Positive | 3423653 - 3424870 | 45832.3 |
| dolichol-phosphate mannosyltransferase | LV84_02961 | Not Available | Negative | 3424845 - 3425600 | 28109.3 |
| glutathione synthetase-like protein | LV84_02962 | Not Available | Positive | 3425699 - 3426577 | 32890.3 |
| tetratricopeptide repeat protein | LV84_02963 | Not Available | Negative | 3426574 - 3427374 | 30334.5 |
| imidazoleglycerol-phosphate dehydratase | LV84_02964 | Not Available | Negative | 3427495 - 3428592 | 41695.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
