Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | LV84_02945 | Not Available | Negative | 3404422 - 3405297 | 32376.7 |
| sugar porter (sp) family mfs transporter | LV84_02946 | Not Available | Negative | 3405287 - 3406633 | 49435.9 |
| acyl-coa hydrolase | LV84_02947 | Not Available | Negative | 3406716 - 3408008 | 47371.0 |
| methylmalonyl-coa mutase | LV84_02948 | Not Available | Positive | 3408248 - 3411625 | 126500.0 |
| putative redox protein | LV84_02949 | Not Available | Positive | 3411674 - 3412090 | 15467.7 |
| hypothetical protein | LV84_02950 | Not Available | Positive | 3412087 - 3412326 | 9521.46 |
| cache domain-containing protein | LV84_02951 | Not Available | Positive | 3412349 - 3413356 | 38077.4 |
| pas domain s-box-containing protein | LV84_02952 | Not Available | Positive | 3413356 - 3416220 | 107565.0 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | LV84_02953 | Not Available | Negative | 3416261 - 3417556 | 46809.5 |
| nicotinamide-nucleotide amidase | LV84_02954 | Not Available | Negative | 3417652 - 3418902 | 45692.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
