Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l32 | LV84_02935 | Not Available | Negative | 3396324 - 3396515 | 7399.2 |
| uncharacterized protein duf177 involved in 23s rrna accumulation | LV84_02936 | Not Available | Negative | 3396534 - 3397103 | 22216.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | LV84_02937 | Not Available | Negative | 3397213 - 3398235 | 37372.3 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | LV84_02938 | Not Available | Positive | 3398356 - 3399141 | 29601.0 |
| magnesium transporter | LV84_02939 | Not Available | Positive | 3399128 - 3400495 | 50497.5 |
| d-3-phosphoglycerate dehydrogenase | LV84_02940 | Not Available | Positive | 3400508 - 3401434 | 35269.8 |
| hypothetical protein | LV84_02941 | Not Available | Positive | 3401898 - 3402281 | 14150.6 |
| uncharacterized membrane protein ycap (duf421 family) | LV84_02942 | Not Available | Positive | 3402477 - 3403190 | 27035.0 |
| transcription elongation factor grea | LV84_02943 | Not Available | Positive | 3403413 - 3403886 | 16973.4 |
| histidine triad (hit) family protein | LV84_02944 | Not Available | Positive | 3403928 - 3404320 | 14679.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
