Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-protein synthetase luxe | LV84_02905 | Not Available | Positive | 3360139 - 3361134 | 37707.8 |
| hypothetical protein | LV84_02906 | Not Available | Positive | 3361279 - 3361398 | 3889.88 |
| peptide-methionine (r)-s-oxide reductase | LV84_02907 | Not Available | Negative | 3361634 - 3362053 | 15967.7 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | LV84_02908 | Not Available | Negative | 3362123 - 3363313 | 43537.9 |
| 23s rrna (cytosine1962-c5)-methyltransferase | LV84_02909 | Not Available | Negative | 3363328 - 3364224 | 34114.8 |
| acyltransferase-like protein | LV84_02910 | Not Available | Positive | 3364648 - 3365466 | 30488.1 |
| acetyltransferase (gnat) family protein | LV84_02911 | Not Available | Positive | 3365463 - 3366431 | 36946.9 |
| hypothetical protein | LV84_02912 | Not Available | Positive | 3366424 - 3366795 | 13635.6 |
| dna gyrase subunit b | LV84_02913 | Not Available | Positive | 3366963 - 3368921 | 72370.2 |
| polyphosphate kinase | LV84_02914 | Not Available | Positive | 3369029 - 3371152 | 81872.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
