Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02895 | Not Available | Negative | 3352301 - 3352774 | 18178.2 |
| hypothetical protein | LV84_02896 | Not Available | Negative | 3352771 - 3353238 | 18052.9 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | LV84_02897 | Not Available | Negative | 3353292 - 3353975 | 26115.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | LV84_02898 | Not Available | Negative | 3353972 - 3354454 | 17686.3 |
| putative zn-dependent peptidase | LV84_02899 | Not Available | Negative | 3354451 - 3355692 | 46666.6 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | LV84_02900 | Not Available | Positive | 3355896 - 3357461 | 60116.3 |
| 5-formyltetrahydrofolate cyclo-ligase | LV84_02901 | Not Available | Positive | 3357451 - 3358023 | 22094.9 |
| hypothetical protein | LV84_02902 | Not Available | Positive | 3358046 - 3358543 | 18874.6 |
| hypothetical protein | LV84_02903 | Not Available | Positive | 3358999 - 3359277 | 11095.3 |
| hypothetical protein | LV84_02904 | Not Available | Negative | 3359403 - 3360071 | 25435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
