Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02875 | Not Available | Negative | 3336934 - 3337401 | 16616.9 |
| hypothetical protein | LV84_02876 | Not Available | Negative | 3337478 - 3337786 | 12022.3 |
| hypothetical protein | LV84_02877 | Not Available | Negative | 3337929 - 3338420 | 18223.9 |
| gtp-binding protein | LV84_02878 | Not Available | Negative | 3338471 - 3339073 | 22506.1 |
| demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | LV84_02879 | Not Available | Positive | 3339197 - 3339919 | 26780.7 |
| outer membrane protein with beta-barrel domain | LV84_02880 | Not Available | Positive | 3339868 - 3340674 | 30353.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | LV84_02881 | Not Available | Positive | 3340755 - 3341519 | 27482.4 |
| d-alanyl-d-alanine dipeptidase | LV84_02882 | Not Available | Positive | 3341516 - 3342262 | 28260.9 |
| hypothetical protein | LV84_02883 | Not Available | Positive | 3342341 - 3343078 | 27571.6 |
| fe-s cluster biogenesis protein nfua | LV84_02884 | Not Available | Positive | 3343257 - 3343838 | 21124.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
