Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein | LV84_02865 | Not Available | Negative | 3326830 - 3328218 | 51080.9 |
| enoyl-acp reductase-like protein | LV84_02866 | Not Available | Negative | 3328461 - 3330020 | 58711.2 |
| glycosyl hydrolase family 16 | LV84_02867 | Not Available | Negative | 3330183 - 3331055 | 33327.3 |
| hypothetical protein | LV84_02868 | Not Available | Negative | 3331245 - 3331487 | 9127.64 |
| integrase/recombinase xerd | LV84_02869 | Not Available | Negative | 3331619 - 3332524 | 34987.3 |
| 3-dehydroquinate dehydratase | LV84_02870 | Not Available | Positive | 3332766 - 3333179 | 15206.3 |
| phosphoserine aminotransferase | LV84_02871 | Not Available | Positive | 3333191 - 3334246 | 39021.5 |
| multiple antibiotic resistance protein | LV84_02872 | Not Available | Positive | 3334575 - 3335165 | 20758.5 |
| ribonuclease hi | LV84_02873 | Not Available | Positive | 3335202 - 3335657 | 17113.5 |
| sugar phosphate isomerase/epimerase | LV84_02874 | Not Available | Negative | 3335710 - 3336831 | 42346.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
