Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine37-n1)-methyltransferase | LV84_02855 | Not Available | Positive | 3316790 - 3317506 | 26242.5 |
| large subunit ribosomal protein l19 | LV84_02856 | Not Available | Positive | 3317557 - 3317922 | 13951.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | LV84_02857 | Not Available | Negative | 3318377 - 3318934 | 20246.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | LV84_02858 | Not Available | Negative | 3318936 - 3319487 | 20017.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | LV84_02859 | Not Available | Negative | 3319536 - 3320459 | 33639.1 |
| phosphoesterase recj-like protein | LV84_02860 | Not Available | Negative | 3320507 - 3321541 | 38125.0 |
| nucleoside diphosphate kinase | LV84_02861 | Not Available | Positive | 3321726 - 3322148 | 14972.8 |
| uncharacterized protein duf4202 | LV84_02862 | Not Available | Positive | 3322486 - 3323067 | 22384.2 |
| hypothetical protein | LV84_02863 | Not Available | Positive | 3323315 - 3324571 | 47148.4 |
| thiol:disulfide interchange protein dsbd | LV84_02864 | Not Available | Negative | 3324568 - 3326652 | 77310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
