Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine1402-2'-o)-methyltransferase | LV84_02835 | Not Available | Positive | 3295413 - 3296123 | 26217.2 |
| membrane dipeptidase | LV84_02836 | Not Available | Positive | 3296127 - 3297197 | 39210.5 |
| 3-hexulose-6-phosphate synthase/6-phospho-3-hexuloisomerase | LV84_02837 | Not Available | Positive | 3297535 - 3298233 | 24705.1 |
| alcohol dehydrogenase/l-iditol 2-dehydrogenase | LV84_02838 | Not Available | Positive | 3298246 - 3299283 | 37008.6 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_02839 | Not Available | Positive | 3299285 - 3300082 | 28878.8 |
| sugar phosphate isomerase/epimerase | LV84_02840 | Not Available | Positive | 3300264 - 3301148 | 34031.5 |
| sugar lactone lactonase yvre | LV84_02841 | Not Available | Positive | 3301279 - 3302157 | 33071.2 |
| susd-like starch-binding protein associating with outer membrane | LV84_02842 | Not Available | Negative | 3302344 - 3304035 | 62543.4 |
| tonb-linked susc/raga family outer membrane protein | LV84_02843 | Not Available | Negative | 3304053 - 3307445 | 124365.0 |
| hypothetical protein | LV84_02844 | Not Available | Negative | 3307476 - 3307682 | 7800.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
