Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | LV84_02815 | Not Available | Positive | 3273213 - 3274025 | 29214.3 |
| 23s rrna pseudouridine2605 synthase | LV84_02816 | Not Available | Positive | 3274182 - 3275582 | 52269.1 |
| hypothetical protein | LV84_02817 | Not Available | Negative | 3275639 - 3275842 | 7877.23 |
| glutamyl-trna synthetase | LV84_02818 | Not Available | Negative | 3275855 - 3277393 | 57494.6 |
| hypothetical protein | LV84_02819 | Not Available | Positive | 3277813 - 3279054 | 46616.8 |
| hypothetical protein | LV84_02820 | Not Available | Positive | 3279051 - 3279641 | 22119.3 |
| transcription-repair coupling factor (superfamily ii helicase) | LV84_02821 | Not Available | Positive | 3279856 - 3283209 | 126875.0 |
| gliding motility-associated lipoprotein gldj/gliding motility-associated lipoprotein gldj,tigr03530 | LV84_02822 | Not Available | Positive | 3283387 - 3284613 | 46377.1 |
| hypothetical protein | LV84_02823 | Not Available | Negative | 3284756 - 3285460 | 27224.9 |
| n-acetylmuramoyl-l-alanine amidase | LV84_02824 | Not Available | Positive | 3285567 - 3286556 | 37050.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
