Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mreb | LV84_02805 | Not Available | Negative | 3260215 - 3261243 | 37346.7 |
| ribosome maturation factor rimp | LV84_02806 | Not Available | Positive | 3261530 - 3262036 | 19002.2 |
| nusa antitermination factor | LV84_02807 | Not Available | Positive | 3262042 - 3263286 | 47580.7 |
| translation initiation factor if-2 | LV84_02808 | Not Available | Positive | 3263349 - 3266252 | 105154.0 |
| carbon starvation protein | LV84_02809 | Not Available | Negative | 3266668 - 3268311 | 59213.1 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | LV84_02810 | Not Available | Positive | 3268539 - 3269381 | 30947.5 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit f | LV84_02811 | Not Available | Positive | 3269512 - 3270813 | 48299.9 |
| arginase family enzyme | LV84_02812 | Not Available | Positive | 3270895 - 3272046 | 43950.0 |
| putative heme/steroid binding protein | LV84_02813 | Not Available | Positive | 3272046 - 3272273 | 8766.37 |
| n-acetylglucosamine kinase-like badf-type atpase | LV84_02814 | Not Available | Positive | 3272274 - 3273116 | 31823.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
