Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein reco | LV84_02795 | Not Available | Negative | 3251505 - 3252194 | 26164.8 |
| thymidine kinase | LV84_02796 | Not Available | Negative | 3252404 - 3252988 | 21868.4 |
| 2fe-2s ferredoxin | LV84_02797 | Not Available | Negative | 3252996 - 3253322 | 12224.8 |
| hypothetical protein | LV84_02798 | Not Available | Positive | 3253356 - 3254480 | 42578.4 |
| hypothetical protein | LV84_02799 | Not Available | Positive | 3254630 - 3255190 | 21816.7 |
| putative metal-dependent hd superfamily phosphohydrolase | LV84_02800 | Not Available | Positive | 3255212 - 3255787 | 22052.9 |
| rod shape determining protein roda | LV84_02801 | Not Available | Negative | 3255784 - 3257058 | 47294.4 |
| penicillin-binding protein 2 | LV84_02802 | Not Available | Negative | 3257058 - 3258860 | 67423.1 |
| rod shape-determining protein mred | LV84_02803 | Not Available | Negative | 3258860 - 3259381 | 19337.5 |
| rod shape-determining protein mrec | LV84_02804 | Not Available | Negative | 3259371 - 3260207 | 30303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
