Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein (tigr02421 family) | LV84_00265 | Not Available | Negative | 331158 - 332993 | 70285.8 |
| hypothetical protein | LV84_00266 | Not Available | Negative | 332993 - 333319 | 12240.9 |
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | LV84_00267 | Not Available | Negative | 333482 - 334789 | 47717.7 |
| hypothetical protein | LV84_00268 | Not Available | Negative | 334786 - 335286 | 18724.1 |
| catalase | LV84_00269 | Not Available | Negative | 335341 - 337482 | 79926.6 |
| hypothetical protein | LV84_00270 | Not Available | Negative | 337811 - 338215 | 15053.8 |
| putative purr-regulated permease perm | LV84_00271 | Not Available | Negative | 338497 - 339702 | 43458.7 |
| glucose/arabinose dehydrogenase | LV84_00272 | Not Available | Negative | 339777 - 341057 | 47202.4 |
| bifunctional non-homologous end joining protein ligd | LV84_00273 | Not Available | Negative | 341229 - 343652 | 92092.0 |
| dna end-binding protein ku | LV84_00274 | Not Available | Negative | 343652 - 344422 | 29607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
