Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | LV84_02785 | Not Available | Positive | 3218385 - 3220427 | 77670.8 |
| putative dna-binding protein | LV84_02786 | Not Available | Positive | 3220785 - 3221429 | 24517.1 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase-like pyridoxal-dependent acc family enzyme | LV84_02787 | Not Available | Negative | 3221404 - 3222327 | 34406.1 |
| 23s rrna pseudouridine1911/1915/1917 synthase | LV84_02788 | Not Available | Positive | 3222386 - 3223420 | 39455.3 |
| hypothetical protein | LV84_02789 | Not Available | Positive | 3224496 - 3228851 | 164555.0 |
| hypothetical protein | LV84_02790 | Not Available | Negative | 3229099 - 3240075 | 358545.0 |
| hypothetical protein | LV84_02791 | Not Available | Negative | 3240527 - 3240742 | 7801.3 |
| hypothetical protein | LV84_02792 | Not Available | Negative | 3241384 - 3246480 | 167044.0 |
| hypothetical protein | LV84_02793 | Not Available | Negative | 3246714 - 3248336 | 56701.0 |
| transcription termination factor rho | LV84_02794 | Not Available | Negative | 3249003 - 3250829 | 68443.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
