Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase family protein | LV84_02775 | Not Available | Positive | 3200414 - 3203764 | 122219.0 |
| pimeloyl-acp methyl ester carboxylesterase | LV84_02776 | Not Available | Positive | 3204511 - 3205293 | 30240.3 |
| membrane fusion protein (multidrug efflux system) | LV84_02777 | Not Available | Positive | 3205355 - 3206437 | 39923.9 |
| multidrug efflux pump | LV84_02778 | Not Available | Positive | 3206439 - 3209501 | 112763.0 |
| outer membrane protein tolc | LV84_02779 | Not Available | Positive | 3209501 - 3210847 | 50927.7 |
| membrane-bound lytic murein transglycosylase f | LV84_02780 | Not Available | Positive | 3210980 - 3212374 | 53095.4 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | LV84_02781 | Not Available | Negative | 3212498 - 3212971 | 16905.7 |
| gnt-i system high-affinity gluconate transporter | LV84_02782 | Not Available | Negative | 3213099 - 3214412 | 46492.8 |
| putative secreted protein (por secretion system target) | LV84_02783 | Not Available | Negative | 3214496 - 3216808 | 84797.2 |
| uncharacterized protein duf4105 | LV84_02784 | Not Available | Positive | 3216850 - 3218037 | 45370.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
