Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf5118 | LV84_02765 | Not Available | Positive | 3188515 - 3191031 | 94467.4 |
| fur family ferric uptake transcriptional regulator | LV84_02766 | Not Available | Positive | 3191315 - 3191728 | 15646.9 |
| hypothetical protein | LV84_02767 | Not Available | Negative | 3191725 - 3191952 | 8049.76 |
| ycxb-like protein | LV84_02768 | Not Available | Positive | 3192102 - 3192575 | 18785.7 |
| 23s rrna pseudouridine2604 synthase | LV84_02769 | Not Available | Negative | 3192713 - 3193444 | 27588.4 |
| peptidase m23-like protein | LV84_02770 | Not Available | Negative | 3193802 - 3195109 | 48176.5 |
| aspartyl-trna synthetase | LV84_02771 | Not Available | Positive | 3195431 - 3197185 | 66468.5 |
| hypothetical protein | LV84_02772 | Not Available | Positive | 3197708 - 3197905 | 7879.56 |
| linoleoyl-coa desaturase | LV84_02773 | Not Available | Positive | 3197961 - 3199040 | 41261.6 |
| putative membrane protein yhhn | LV84_02774 | Not Available | Negative | 3199374 - 3200069 | 26385.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
