Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase | LV84_02745 | Not Available | Positive | 3171102 - 3172577 | 55413.4 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | LV84_02746 | Not Available | Negative | 3172645 - 3173118 | 18237.2 |
| aldehyde dehydrogenase (nad+) | LV84_02747 | Not Available | Positive | 3173476 - 3174909 | 52992.1 |
| acetyl esterase/lipase | LV84_02748 | Not Available | Positive | 3174912 - 3175790 | 32263.1 |
| hypothetical protein | LV84_02749 | Not Available | Negative | 3175984 - 3176217 | 8840.64 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_02750 | Not Available | Negative | 3176192 - 3176794 | 23584.6 |
| uncharacterized protein duf3127 | LV84_02751 | Not Available | Positive | 3177144 - 3177491 | 12837.0 |
| hypothetical protein | LV84_02752 | Not Available | Positive | 3177504 - 3177959 | 17690.7 |
| hypothetical protein | LV84_02753 | Not Available | Negative | 3177956 - 3178099 | 5266.78 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | LV84_02754 | Not Available | Negative | 3178139 - 3178654 | 17896.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
