Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | LV84_02735 | Not Available | Positive | 3161993 - 3162748 | 28420.7 |
| luxr family two component transcriptional regulator | LV84_02736 | Not Available | Positive | 3162806 - 3163438 | 24356.5 |
| scyllo-inositol 2-dehydrogenase (nadp+) | LV84_02737 | Not Available | Positive | 3163435 - 3164481 | 38805.4 |
| hypothetical protein | LV84_02738 | Not Available | Positive | 3164538 - 3164972 | 15818.8 |
| outer membrane protein with beta-barrel domain | LV84_02739 | Not Available | Negative | 3165347 - 3166027 | 24858.9 |
| glycyl-trna synthetase | LV84_02740 | Not Available | Positive | 3166158 - 3167624 | 56225.8 |
| hypothetical protein | LV84_02741 | Not Available | Negative | 3167762 - 3167899 | 5287.4 |
| hypothetical protein | LV84_02742 | Not Available | Negative | 3168036 - 3169175 | 41633.3 |
| hypothetical protein | LV84_02743 | Not Available | Negative | 3169411 - 3169761 | 12921.6 |
| hypothetical protein | LV84_02744 | Not Available | Negative | 3169970 - 3170992 | 37057.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
