Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family hydrogen peroxide-inducible transcriptional activator | LV84_02725 | Not Available | Positive | 3153350 - 3154279 | 35564.6 |
| hypothetical protein | LV84_02726 | Not Available | Negative | 3154303 - 3154806 | 20056.3 |
| hypothetical protein | LV84_02727 | Not Available | Negative | 3154914 - 3155093 | 6778.33 |
| hypothetical protein | LV84_02728 | Not Available | Negative | 3155062 - 3155628 | 21365.0 |
| xtp/ditp diphosphohydrolase | LV84_02729 | Not Available | Positive | 3155916 - 3156491 | 21012.8 |
| uridine kinase | LV84_02730 | Not Available | Positive | 3156529 - 3157146 | 23865.6 |
| hypothetical protein | LV84_02731 | Not Available | Positive | 3157320 - 3157625 | 11169.5 |
| secd/secf fusion protein | LV84_02732 | Not Available | Positive | 3157718 - 3160687 | 107022.0 |
| hypothetical protein | LV84_02733 | Not Available | Positive | 3160835 - 3161245 | 15296.7 |
| hypothetical protein | LV84_02734 | Not Available | Positive | 3161248 - 3162000 | 29450.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
