Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02715 | Not Available | Negative | 3143150 - 3143611 | 16906.1 |
| hypothetical protein | LV84_02716 | Not Available | Positive | 3144041 - 3145084 | 39776.9 |
| putative membrane protein | LV84_02717 | Not Available | Negative | 3145105 - 3145521 | 15526.3 |
| prolyl oligopeptidase family protein | LV84_02718 | Not Available | Negative | 3145567 - 3146373 | 30057.8 |
| putative zinc-type alcohol dehydrogenase-like protein | LV84_02719 | Not Available | Negative | 3146488 - 3147537 | 37945.4 |
| 6-phosphogluconolactonase | LV84_02720 | Not Available | Negative | 3147679 - 3148392 | 26267.1 |
| glucose-6-phosphate 1-dehydrogenase | LV84_02721 | Not Available | Negative | 3148641 - 3150167 | 58434.5 |
| 6-phosphogluconate dehydrogenase | LV84_02722 | Not Available | Positive | 3150363 - 3151778 | 52075.2 |
| alkyl hydroperoxide reductase subunit d | LV84_02723 | Not Available | Negative | 3152023 - 3152613 | 21980.7 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | LV84_02724 | Not Available | Negative | 3152691 - 3153248 | 21052.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
