Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-carotene 3-hydroxylase | LV84_02705 | Not Available | Positive | 3133560 - 3134006 | 17442.6 |
| dna-binding transcriptional merr regulator | LV84_02706 | Not Available | Positive | 3134003 - 3134893 | 33558.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_02707 | Not Available | Positive | 3135091 - 3135603 | 19796.7 |
| phytoene desaturase | LV84_02708 | Not Available | Positive | 3135608 - 3137086 | 55760.7 |
| phytoene/squalene synthetase | LV84_02709 | Not Available | Positive | 3137108 - 3137950 | 32018.6 |
| lycopene cyclase domain-containing protein | LV84_02710 | Not Available | Positive | 3137953 - 3138654 | 27507.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | LV84_02711 | Not Available | Positive | 3138667 - 3139512 | 31875.9 |
| beta-carotene ketolase (crtw type) | LV84_02712 | Not Available | Positive | 3139470 - 3140237 | 29868.0 |
| outer membrane receptor protein involved in fe transport | LV84_02713 | Not Available | Positive | 3140252 - 3142651 | 89888.1 |
| bacteriocin resistance ydei/ompd-like protein | LV84_02714 | Not Available | Negative | 3142654 - 3143109 | 17395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
