Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd-like starch-binding protein associating with outer membrane | LV84_00255 | Not Available | Negative | 314144 - 315742 | 56778.6 |
| tonb-linked susc/raga family outer membrane protein | LV84_00256 | Not Available | Negative | 315744 - 318809 | 109426.0 |
| glutamine synthetase | LV84_00257 | Not Available | Negative | 319268 - 321430 | 80289.7 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | LV84_00258 | Not Available | Positive | 321661 - 322980 | 49831.1 |
| 1,4-alpha-glucan branching enzyme | LV84_00259 | Not Available | Positive | 323132 - 325141 | 77846.0 |
| hypothetical protein | LV84_00260 | Not Available | Positive | 325247 - 325921 | 25805.5 |
| uncharacterized protein ydei (yjbr/cyay-like superfamily) | LV84_00261 | Not Available | Positive | 325934 - 326560 | 23602.7 |
| choline dehydrogenase-like flavoprotein | LV84_00262 | Not Available | Negative | 326638 - 328326 | 63325.0 |
| succinylglutamate desuccinylase | LV84_00263 | Not Available | Positive | 328800 - 329744 | 35203.6 |
| glutathione synthase | LV84_00264 | Not Available | Negative | 330095 - 331138 | 38625.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
