Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02655 | Not Available | Negative | 3072523 - 3072951 | 16427.8 |
| hypothetical protein | LV84_02656 | Not Available | Negative | 3073295 - 3073570 | 10484.6 |
| voltage-gated potassium channel | LV84_02657 | Not Available | Negative | 3074202 - 3074459 | 10137.9 |
| dna topoisomerase-3 | LV84_02658 | Not Available | Positive | 3074708 - 3077011 | 86972.6 |
| putative heme-binding domain-containing protein | LV84_02659 | Not Available | Negative | 3077442 - 3080618 | 117721.0 |
| uncharacterized protein duf1080 | LV84_02660 | Not Available | Negative | 3080650 - 3081273 | 23082.2 |
| arac-like dna-binding protein | LV84_02661 | Not Available | Negative | 3081835 - 3083286 | 55316.6 |
| alpha-glucosidase (family gh31 glycosyl hydrolase) | LV84_02662 | Not Available | Negative | 3083528 - 3085705 | 81315.4 |
| acetyl esterase/lipase | LV84_02663 | Not Available | Negative | 3085961 - 3087463 | 55841.3 |
| cellulase-like ig domain-containing protein | LV84_02664 | Not Available | Negative | 3087522 - 3089825 | 87088.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
