Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamidase/pyrazinamidase | LV84_02635 | Not Available | Negative | 3051986 - 3052621 | 23193.4 |
| hypothetical protein | LV84_02636 | Not Available | Negative | 3052599 - 3052718 | 4412.59 |
| nicotinate phosphoribosyltransferase | LV84_02637 | Not Available | Negative | 3052663 - 3054216 | 57780.8 |
| eama domain-containing membrane protein rard | LV84_02638 | Not Available | Negative | 3054247 - 3055062 | 30310.2 |
| peroxiredoxin q/bcp | LV84_02639 | Not Available | Positive | 3055307 - 3055798 | 18763.7 |
| lipoprotein-releasing system atp-binding protein | LV84_02640 | Not Available | Negative | 3056102 - 3056752 | 23445.5 |
| succinyl-coa synthetase beta subunit | LV84_02641 | Not Available | Positive | 3056894 - 3058108 | 43218.0 |
| Trna-arg | Not Available | Not Available | Positive | 3058148 - 3058224 | Not Available |
| hypothetical protein | LV84_02643 | Not Available | Negative | 3058357 - 3059127 | 28815.9 |
| virulence rhum family protein | LV84_02644 | Not Available | Positive | 3059372 - 3059791 | 16637.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
