Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secreted protein | LV84_02615 | Not Available | Positive | 3020908 - 3022257 | 49847.6 |
| tonb-linked susc/raga family outer membrane protein | LV84_02616 | Not Available | Positive | 3022732 - 3025749 | 110066.0 |
| putative outer membrane starch-binding protein | LV84_02617 | Not Available | Positive | 3025756 - 3027426 | 62175.5 |
| tonb-linked susc/raga family outer membrane protein | LV84_02618 | Not Available | Positive | 3027769 - 3030840 | 115762.0 |
| putative outer membrane starch-binding protein | LV84_02619 | Not Available | Positive | 3030858 - 3032693 | 69094.4 |
| laci family transcriptional regulator | LV84_02620 | Not Available | Negative | 3032915 - 3033937 | 37934.8 |
| glucuronate isomerase | LV84_02621 | Not Available | Positive | 3034104 - 3035543 | 55429.3 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_02622 | Not Available | Positive | 3035546 - 3036364 | 28844.8 |
| mannonate dehydratase | LV84_02623 | Not Available | Positive | 3036457 - 3037632 | 43912.6 |
| maltose o-acetyltransferase | LV84_02624 | Not Available | Positive | 3037629 - 3038183 | 20158.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
